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diff --git a/tex/thesis/usydthesis.cls b/tex/thesis/usydthesis.cls
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+% LaTeX2e thesis style.    by David Symonds, 2003
+%
+%   This LaTeX style file is for a University of Sydney thesis.
+%
+%   (based on a style file by Andrew Mathas)
+
+\NeedsTeXFormat{LaTeX2e}
+\ProvidesClass{usydthesis}
+
+\include{config}
+
+% options %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+\DeclareOption*{\PassOptionsToClass{\CurrentOption}{amsart}}
+
+\ProcessOptions
+\LoadClass[a4paper,oneside,11pt,reqno]{amsbook}
+
+\hfuzz=4pt
+\vfuzz=4pt
+
+% packages %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+% for the University crest
+\usepackage{epsfig}
+\usepackage{graphicx}
+
+% cross-references
+\usepackage{style/prettyref}
+
+% Maths and algorithms
+\usepackage{amssymb,amsmath}
+\newcommand{\theHalgorithm}{\arabic{algorithm}}
+\usepackage[ruled]{algorithm}
+\usepackage{algorithmic}
+
+% Fancy footnotes
+\usepackage[stable]{style/footmisc}
+
+% times fonts look better
+\usepackage{times}
+\usepackage[T1]{fontenc}
+\usepackage{textcomp}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+% we now change a few things in the standard amsbook setup
+
+% sections are numbered within the chapters
+\numberwithin{section}{chapter}
+\numberwithin{equation}{chapter}
+
+\def\chapter{%
+  \cleardoublepage
+  \thispagestyle{plain}\global\@topnum\z@
+  \@afterindenttrue \secdef\@chapter\@schapter}
+\def\pagechapter{%
+  \clearpage
+  \thispagestyle{plain}\global\@topnum\z@
+  \@afterindenttrue \secdef\@chapter\@schapter}
+
+% section numbers in appendices shouldn't have a dot in them
+% \def\appendix{\par
+%   \c@chapter\z@ \c@section\z@
+%   \let\chaptername\appendixname
+%   \def\thechapter{\@Alph\c@chapter}
+%   \renewcommand\thesection{\thechapter{}\arabic{section}}
+% }
+
+%%put dotfill in toc entries and make chapter entries bold 
+\def\contentsname{\normalfont\scshape{Contents}}
+\def\@tocline#1#2#3#4#5#6#7{\relax
+\ifnum #1>\c@tocdepth % then omit
+\else
+  \par \addpenalty\@secpenalty\addvspace{#2}%
+  \begingroup \hyphenpenalty\@M
+  \@ifempty{#4}{%
+    \@tempdima\csname r@tocindent\number#1\endcsname\relax
+  }{%
+    \@tempdima#4\relax
+  }%
+  \parindent\z@ \leftskip#3\relax \advance\leftskip\@tempdima\relax
+  \rightskip\@pnumwidth plus4em \parfillskip-\@pnumwidth
+  {#5\leavevmode\hskip-\@tempdima #6}\nobreak\relax
+  \ifnum #1>0 % only dot for entries below chapter level
+    \dotfill\hbox to\@pnumwidth{\@tocpagenum{#5{#7}}}\par
+  \else
+    \hfill\hbox to\@pnumwidth{\@tocpagenum{#5{#7}}}\par
+  \fi
+  \nobreak
+  \endgroup
+\fi
+}
+\def\l@chapter{\@tocline{0}{8pt plus1pt}{0pt}{}{\bfseries}}
+\def\l@subsection{\@tocline{2}{0pt}{30pt}{}{}}
+% tocline parameters:
+%   1: depth (0=chapter, 1=section, etc.)
+%   2: spacing above
+%   3: indent
+%   4: ?
+%   5: font modifier
+%   6: TOC entry
+%   7: page number
+
+% chapter at top of chapters should be \sc rather than in capitals
+\def\@makechapterhead#1{\global\topskip 7.5pc\relax
+  \begingroup
+  \fontsize{\@xivpt}{18}\bfseries\centering
+    \ifnum\c@secnumdepth>\m@ne
+      \leavevmode \hskip-\leftskip
+      \rlap{\vbox to\z@{\vss
+          \centerline{\normalsize\mdseries
+              \@xp{\scshape\chaptername}\enspace\thechapter}
+          \vskip 3pc}}\hskip\leftskip\fi
+     #1\par \endgroup
+  \vskip 2pt \hrulefill
+  \skip@34\p@ \advance\skip@-\normalbaselineskip
+  \vskip\skip@ }
+
+% the standard amsbook headings are not very good %%%%
+\def\partrunhead#1#2#3{%
+  \@ifnotempty{#2}{\ignorespaces#1 #2\unskip\@ifnotempty{#3}{ }}%
+  \textsc{#3}
+}
+
+\let\chapterrunhead\partrunhead
+\let\sectionrunhead\partrunhead
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+% date on title page of thesis
+\def\Today{\number\day\space\ifcase\month\or January\or February\or March\or
+  April\or May\or June\or July\or August\or September\or
+  October\or November\or December\fi\space\number\year}
+
+\def\@sid#1{\textsc{sid}: #1}
+\def\@supervisor#1{Supervisor: #1}
+\def\@assocsupervisor#1{Associate Supervisor: #1}
+  
+% thesis title page
+\def\@maketitle{
+  \cleardoublepage\thispagestyle{empty}%
+  \begingroup \topskip\z@skip
+    \null\vfil
+    \begingroup
+    \LARGE\bfseries \centering
+    \openup\medskipamount
+    \@title\par\vspace{30pt}%
+    \centering\mdseries{\sc \authors}\par
+    \centering\@sid{\sid}\par\bigskip
+    \endgroup
+    \vfil
+    \begin{center}
+      \vfil
+      \fontsize{12}{12}
+      \centering\@supervisor{\supervisor}
+      \@ifundefined{assocsupervisor}{} {
+       \\ \centering\@assocsupervisor{\assocsupervisor}
+        }
+      \par\bigskip
+      This thesis is submitted in partial fulfillment of\\
+      the requirements for the degree of\\
+      \degree
+    \vfil
+      {\department\\
+      The University of Sydney\\
+      Australia}\\
+    \vfil
+      \Today
+    \vskip50mm
+      \includegraphics[width=102mm]{usyd-primary-colour}\\
+    \end{center}
+  \endgroup
+  %\cleardoublepage
+  \newpage
+}
+
+% insert page break after tableofcontents
+\def\tableofcontents{%
+  \@starttoc{toc}\contentsname\newpage
+}
+
+% control spacing in the bibliograph and fix up the toc entry
+\def\thebibliography#1{
+  \c@chapter\z@ \c@section\z@\let\chaptername\relax
+  \chapter*{References}
+\singlespace  
+  \list
+  {[\arabic{enumi}]}{\settowidth\labelwidth{[#1]}\leftmargin\labelwidth
+  \advance\leftmargin\labelsep
+  \itemsep 11pt \parsep\z@\topsep\z@\parskip\z@
+  \usecounter{enumi}}
+  \def\newblock{\hskip .11em plus .33em minus .07em}
+  \sloppy\clubpenalty4000\widowpenalty4000
+  \sfcode`\.=1000\relax
+}
+  
+\def\@lbibitem[#1]#2{\item[]\hspace{-\parindent}\if@filesw 
+      { \def\protect##1{\string ##1\space}\immediate
+        \write\@auxout{\string\bibcite{#2}{#1}}\fi\ignorespaces}}
+
+\def\@bibitem#1{\item\if@filesw \immediate\write\@auxout
+       {\string\bibcite{#1}{\the\c@enumi}}\fi\ignorespaces}
+
+% Maybe some people do not want subsection headings indented
+%\def\subsection{\@startsection{subsection}{2}%
+%  \z@{0.7\linespacing}{.5\linespacing}%
+%  {\normalfont\bfseries}}
+
+\def\section{\@startsection {section}{1}{\z@}{-2.0ex plus
+    -0.5ex minus -.2ex}{1.5ex plus 0.3ex minus .2ex}{\Large\bf\raggedright}}
+\def\subsection{\@startsection{subsection}{2}{\z@}{-1.8ex plus
+    -0.5ex minus -.2ex}{0.8ex plus .2ex}{\large\bf\raggedright}}
+\def\subsubsection{\@startsection{subsubsection}{3}{\z@}{1.5ex plus
+   0.5ex minus .2ex}{0.5ex plus .2ex}{\normalsize\bf\raggedright}}
+\def\paragraph{\@startsection{paragraph}{4}{\z@}{1.5ex plus
+   0.5ex minus .2ex}{-1em}{\normalsize\bf}}
+\def\subparagraph{\@startsection{subparagraph}{5}{\parindent}{1.5ex plus
+   0.5ex minus .2ex}{-1em}{\normalsize\bf}}
+
+% global macros %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+% Use "... \LaTeX{} ..." when mentioning LaTeX
+\input texnames.sty
+
+% Paragraphs should not have their initial line indented, but instead we want
+% a blank line between paragraphs. We do not want this for some stuff, so use
+% the "\setupParagraphs" command just before the first chapter
+\newcommand{\setupParagraphs}{
+    \setlength{\parindent}{0cm}
+    \addtolength{\parskip}{0.5\baselineskip}
+}
+
+% change the default labels for enumerate
+%\renewcommand{\labelenumi}{\alph{enumi})}
+%\renewcommand{\labelenumii}{(\roman{enumii})}
+
+% Algorithms should be numbered 'A', 'B', etc.
+%\renewcommand{\thealgorithm}{\Alph{algorithm}}
+
+% Figures should be numbered globally
+\renewcommand{\thefigure}{\thechapter.\arabic{figure}}
+\renewcommand{\thetable}{\thechapter.\arabic{table}}
+
+\renewcommand{\theequation}{\thechapter.\arabic{equation}}
+
+
+% some utilities
+\newcommand*{\marginnote}[1]
+    {\mbox{}\marginpar{$\leftarrow$ \small #1}\ignorespaces}
+\newcommand{\attention}[1][\attentionsymbol]
+    {\mbox{}\marginpar{\raggedright #1}}
+\newcommand*{\attentionsymbol}{$\leftarrow$ \large\bfseries !}
+
+% maths stuff
+\newtheorem{lemma}{Lemma}
+\newcommand{\sd}[2]{#1 \triangle #2}
+
+\newcommand{\data}[1]{\texttt{#1}}
+
+\newcommand{\seesec}[1]{(see \Sec{#1})}
+\newcommand{\seefig}[1]{(see \Fig{#1})}
+\newcommand{\seeapp}[1]{(see \App{#1})}
+\newcommand{\seetab}[1]{(see \Tab{#1})}
+
+\def\Sec#1{Section~\ref{#1}}
+\def\Fig#1{Figure~\ref{#1}}
+\def\Eqn#1{Equation~\ref{#1}}
+\def\App#1{Appendix~\ref{#1}}
+\def\sec#1{section~\ref{#1}}
+\def\fig#1{figure~\ref{#1}}
+\def\eqn#1{equation~\ref{#1}}
+\def\Tab#1{Table~\ref{#1}}
+\def\tab#1{table~\ref{#1}}
+
+\newcommand{\NB}{N.B.\@\xspace}
+\newcommand{\eg}{e.g.}
+\newcommand{\Eg}{E.g.}
+\newcommand{\ie}{i.e.}
+\newcommand{\Ie}{I.e.}
+\newcommand{\etc}{etc.}
+\newcommand{\etal}{{\em et al}.}
+\newcommand{\etseq}{{\em et seq}.}
+\newcommand{\precis}{pr\'ecis}
+\newcommand{\Precis}{Pr\'ecis}
+\newcommand{\role}{r\^ole}
+\newcommand{\Role}{R\^ole}
+\newcommand{\tm}{\raisebox{1ex}{\tiny TM}}
+\newcommand{\cpright}{\raisebox{1ex}{\tiny\copyright}}
+\newcommand{\degrees}{\raisebox{1.2ex}{\tiny\ensuremath{\circ}}}
+
+
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+% remove final '.' from section numbers (text)
+% short title in TOC
+\def\@sect#1#2#3#4#5#6[#7]#8{%
+  \edef\@toclevel{\ifnum#2=\@m 0\else\number#2\fi}%
+  \ifnum #2>\c@secnumdepth \let\@secnumber\@empty
+  \else \@xp\let\@xp\@secnumber\csname the#1\endcsname\fi
+  \@tempskipa #5\relax
+  \ifnum #2>\c@secnumdepth
+    \let\@svsec\@empty
+  \else
+    \refstepcounter{#1}%
+    \edef\@secnumpunct{%
+      \ifdim\@tempskipa>\z@ % not a run-in section heading
+        \@ifnotempty{#8}{\@nx\enspace}%
+      \else \@nx\enspace
+      \fi
+    }%
+    \protected@edef\@svsec{%
+      \ifnum#2<\@m
+        \@ifundefined{#1name}{}{%
+          \ignorespaces\csname #1name\endcsname\space
+        }%
+      \fi
+      \@seccntformat{#1}%
+    }%
+  \fi
+  \ifdim \@tempskipa>\z@ % then this is not a run-in section heading
+    \begingroup #6\relax
+    \@hangfrom{\hskip #3\relax\@svsec}{\interlinepenalty\@M #8\par}%
+    \endgroup
+  \csname #1mark\endcsname{#7}%
+    \ifnum#2>\@m \else \@tocwrite{#1}{#7}\fi
+  \else
+  \def\@svsechd{#6\hskip #3\@svsec
+    \@ifnotempty{#8}{\ignorespaces#8\unskip
+       \@addpunct.}%
+    \ifnum#2>\@m \else \@tocwrite{#1}{#8}\fi
+  }%
+  \fi
+  \global\@nobreaktrue
+  \@xsect{#5}}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+% remove '.' after section number (TOC)
+\renewcommand{\tocsection}[3]{%
+  \indentlabel{\@ifnotempty{#2}{\ignorespaces#1 #2\quad}}#3}
+\let\tocsubsection\tocsection
+\let\tocsubsubsection\tocsection
+\let\l@paragraph\l@subsubsection
+\let\tocparagraph\tocsection
+\let\l@subparagraph\l@subsubsection
+\let\tocsubparagraph\tocsection
+\let\tocpart\tocsection
+\let\tocchapter\tocsection
+\renewcommand{\tocappendix}[3]{%
+  \indentlabel{#1\@ifnotempty{#2}{ #2}\quad}#3}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+% table and figure captions use ':' not '.'
+\long\def\@makecaption#1#2{%
+  \setbox\@tempboxa\vbox{\color@setgroup
+    \advance\hsize-2\captionindent\noindent
+    \@captionfont\@captionheadfont#1\@xp\@ifnotempty\@xp
+        {\@cdr#2\@nil}{:\@captionfont\upshape\enspace#2}%
+    \unskip\kern-2\captionindent\par
+    \global\setbox\@ne\lastbox\color@endgroup}%
+  \ifhbox\@ne % the normal case
+    \setbox\@ne\hbox{\unhbox\@ne\unskip\unskip\unpenalty\unkern}%
+  \fi
+  \ifdim\wd\@tempboxa=\z@ % this means caption will fit on one line
+    \setbox\@ne\hbox to\columnwidth{\hss\kern-2\captionindent\box\@ne\hss}%
+  \else % tempboxa contained more than one line
+    \setbox\@ne\vbox{\unvbox\@tempboxa\parskip\z@skip
+        \noindent\unhbox\@ne\advance\hsize-2\captionindent\par}%
+  \fi
+  \ifnum\@tempcnta<64 % if the float IS a figure...
+    \addvspace\abovecaptionskip
+    \hbox to\hsize{\kern\captionindent\box\@ne\hss}%
+  \else % if the float IS NOT a figure...
+    \addvspace\abovecaptionskip
+    \hbox to\hsize{\kern\captionindent\box\@ne\hss}%
+    \nobreak
+    \vskip\belowcaptionskip
+  \fi
+\relax
+}
+
+
+\endinput