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General work on the equation systems. Trying to get them to generate
correctly with the MCF stuff. It's harder than it seems!
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Adding function arguments to the system, as well as making it slightly easier
to read.
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Also some contribution writing stuff.
Basically: lots of work.
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The solver seems to work fine when run as a tool by itself, but not in the clang stuff. Very annoying.
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Still not there, but more non-functional code is there.
Splitting blocks into sub-blocks now works, as does some of the guard stuff and
the general "shape" of the resulting equation system.
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